Agent-Based Modeling and Bifurcation Analysis Reveal Mechanisms of Macrophage Polarization and Phenotype Pattern Distribution Publisher Pubmed



Nickaeen N¹ ; Ghaisari J¹ ; Heiner M² ; Moein S³ ; Gheisari Y³ Show Affiliations
Source: Scientific Reports Published:2019

Abstract

Macrophages play a key role in tissue regeneration by polarizing to different destinies and generating various phenotypes. Recognizing the underlying mechanisms is critical in designing therapeutic procedures targeting macrophage fate determination. Here, to investigate the macrophage polarization, a nonlinear mathematical model is proposed in which the effect of IL4, IFNγ and LPS, as external stimuli, on STAT1, STAT6, and NFκB is studied using bifurcation analysis. The existence of saddle-node bifurcations in these internal key regulators allows different combinations of steady state levels which are attributable to different fates. Therefore, we propose dynamic bifurcation as a crucial built-in mechanism of macrophage polarization. Next, in order to investigate the polarization of a population of macrophages, bifurcation analysis is employed aligned with agent-based approach and a two-layer model is proposed in which the information from single cells is exploited to model the behavior in tissue level. Also, in this model, a partial differential equation describes the diffusion of secreted cytokines in the medium. Finally, the model was validated against a set of experimental data. Taken together, we have here developed a cell and tissue level model of macrophage polarization behavior which can be used for designing therapeutic interventions. © 2019, The Author(s).