Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends

Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends Publisher Pubmed

Fattahi Z¹ ; Mohseni M¹ ; Beheshtian M^{1, 2} ; Jafarpour A^{3, 4} ; Jalalvand K¹ ; Keshavarzi F¹ ; Behravan H¹ ; Ghodratpour F¹ ; Ashrafi FZ¹ ; Kalhor M¹ ; Azad M² ; Koshki M² ; Ghaziasadi A³ ; Soveyzi M¹ Show All Authors

Fattahi Z¹
Mohseni M¹
Beheshtian M^{1, 2}
Jafarpour A^{3, 4}
Jalalvand K¹
Keshavarzi F¹
Behravan H¹
Ghodratpour F¹
Ashrafi FZ¹
Kalhor M¹
Azad M²
Koshki M²
Ghaziasadi A³
Soveyzi M¹
Abdollahi A⁵
Kiani SJ⁶
Ataeipirkooh A⁶
Rezaeiazhar I³
Bokharaeisalim F⁶
Haghshenas MR⁷
Babamahmoodi F⁷
Mokhames Z⁸
Soleimani A⁹
Elahi Z¹
Ziaee M¹⁰
Javanmard D¹⁰
Ghafari S¹⁰
Ezani A¹¹
Moghaddam AA¹²
Shahrakisanavi F¹²
Shahri SMH¹³
Azaran A¹⁴
Yousefi F¹⁵
Moattari A¹⁶
Moghadami M¹⁷
Fakhim H¹⁸
Ataei B¹⁸
Nasri E¹⁸
Poortahmasebi V¹⁹
Varshochi M²⁰
Mojtahedi A²¹
Jalilian F²²
Khazeni M²³
Moradi A²⁴
Tabarraei A²⁴
Piroozmand A²⁵
Yahyapour Y²⁶
Bayani M²⁶
Tavangar F²⁷
Yaghoubi M²⁸
Keramat F²⁹
Tavakoli M³⁰
Jalali T^{30, 31}
Pouriayevali MH^{30, 31}
Salehivaziri M^{30, 31}
Khorshid HRK¹
Najafipour R¹
Malekzadeh R³²
Kahrizi K¹
Jazayeri SM³
Najmabadi H¹

Source: Archives of Iranian Medicine Published:2022

Abstract

Background: Complete SARS-CoV-2 genome sequencing in the early phase of the outbreak in Iran showed two independent viral entries. Subsequently, as part of a genome surveillance project, we aimed to characterize the genetic diversity of SARS-CoV-2 in Iran over one year after emerging. Methods: We provided 319 SARS-CoV-2 whole-genome sequences used to monitor circulating lineages in March 2020-May 2021 time interval. Results: The temporal dynamics of major SARS-CoV-2 clades/lineages circulating in Iran is comparable to the global perspective and represent the 19A clade (B.4) dominating the first disease wave, followed by 20A (B.1.36), 20B (B.1.1.413), 20I (B.1.1.7), leading the second, third and fourth waves, respectively. We observed a mixture of circulating B.1.36, B.1.1.413, B.1.1.7 lineages in winter 2021, paralleled in a fading manner for B.1.36/B.1.1.413 and a growing rise for B.1.1.7, prompting the fourth outbreak. Entry of the Delta variant, leading to the fifth disease wave in summer 2021, was detected in April 2021. This study highlights three lineages as hallmarks of the SARS-CoV-2 outbreak in Iran; B4, dominating early periods of the epidemic, B.1.1.413 (B.1.1 with the combination of [D138Y-S477N-D614G] spike mutations) as a characterizing lineage in Iran, and the co-occurrence of [I100T-L699I] spike mutations in half of B.1.1.7 sequences mediating the fourth peak. It also designates the renowned combination of G and GR clades’ mutations as the top recurrent mutations. Conclusion: In brief, we provided a real-time and comprehensive picture of the SARS-CoV-2 genetic diversity in Iran and shed light on the SARS-CoV-2 transmission and circulation on the regional scale. © 2022 Academy of Medical Sciences of I.R. Iran. All rights reserved.

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Style	Citing Format
MLA	Fattahi Z, et al.. "Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends." Archives of Iranian Medicine, vol. 25, no. 8, 2022, pp. 508-522.
APA	Fattahi Z, Mohseni M, Beheshtian M, Jafarpour A, Jalalvand K, Keshavarzi F, Behravan H, Ghodratpour F, Ashrafi FZ, Kalhor M, Azad M, Koshki M, Ghaziasadi A, Soveyzi M, Abdollahi A, Kiani SJ, Ataeipirkooh A, Rezaeiazhar I, Bokharaeisalim F, ... Najmabadi H (2022). Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends. Archives of Iranian Medicine, 25(8), 508-522.
Chicago	Fattahi Z, Mohseni M, Beheshtian M, Jafarpour A, Jalalvand K, Keshavarzi F, Behravan H, et al.. "Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends." Archives of Iranian Medicine 25, no. 8 (2022): 508-522.
Harvard	Fattahi Z et al. (2022) 'Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends', Archives of Iranian Medicine, 25(8), pp. 508-522.
Vancouver	Fattahi Z, Mohseni M, Beheshtian M, Jafarpour A, Jalalvand K, Keshavarzi F, et al.. Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends. Archives of Iranian Medicine. 2022;25(8):508-522.
BibTex	@article{ author = {Fattahi Z and Mohseni M and Beheshtian M and Jafarpour A and Jalalvand K and Keshavarzi F and Behravan H and Ghodratpour F and Ashrafi FZ and Kalhor M and Azad M and Koshki M and Ghaziasadi A and Soveyzi M and Abdollahi A and Kiani SJ and Ataeipirkooh A and Rezaeiazhar I and Bokharaeisalim F and Haghshenas MR and Babamahmoodi F and Mokhames Z and Soleimani A and Elahi Z and Ziaee M and Javanmard D and Ghafari S and Ezani A and Moghaddam AA and Shahrakisanavi F and Shahri SMH and Azaran A and Yousefi F and Moattari A and Moghadami M and Fakhim H and Ataei B and Nasri E and Poortahmasebi V and Varshochi M and Mojtahedi A and Jalilian F and Khazeni M and Moradi A and Tabarraei A and Piroozmand A and Yahyapour Y and Bayani M and Tavangar F and Yaghoubi M and Keramat F and Tavakoli M and Jalali T and Pouriayevali MH and Salehivaziri M and Khorshid HRK and Najafipour R and Malekzadeh R and Kahrizi K and Jazayeri SM and Najmabadi H}, title = {Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends}, journal = {Archives of Iranian Medicine}, volume = {25}, number = {8}, pages = {508-522}, year = {2022} }
RIS	TY - JOUR AU - Fattahi Z AU - Mohseni M AU - Beheshtian M AU - Jafarpour A AU - Jalalvand K AU - Keshavarzi F AU - Behravan H AU - Ghodratpour F AU - Ashrafi FZ AU - Kalhor M AU - Azad M AU - Koshki M AU - Ghaziasadi A AU - Soveyzi M AU - Abdollahi A AU - Kiani SJ AU - Ataeipirkooh A AU - Rezaeiazhar I AU - Bokharaeisalim F AU - Haghshenas MR AU - Babamahmoodi F AU - Mokhames Z AU - Soleimani A AU - Elahi Z AU - Ziaee M AU - Javanmard D AU - Ghafari S AU - Ezani A AU - Moghaddam AA AU - Shahrakisanavi F AU - Shahri SMH AU - Azaran A AU - Yousefi F AU - Moattari A AU - Moghadami M AU - Fakhim H AU - Ataei B AU - Nasri E AU - Poortahmasebi V AU - Varshochi M AU - Mojtahedi A AU - Jalilian F AU - Khazeni M AU - Moradi A AU - Tabarraei A AU - Piroozmand A AU - Yahyapour Y AU - Bayani M AU - Tavangar F AU - Yaghoubi M AU - Keramat F AU - Tavakoli M AU - Jalali T AU - Pouriayevali MH AU - Salehivaziri M AU - Khorshid HRK AU - Najafipour R AU - Malekzadeh R AU - Kahrizi K AU - Jazayeri SM AU - Najmabadi H TI - Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends JO - Archives of Iranian Medicine VL - 25 IS - 8 SP - 508 EP - 522 PY - 2022 ER -

Style

Citing Format

MLA

Fattahi Z, et al.. "Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends." Archives of Iranian Medicine, vol. 25, no. 8, 2022, pp. 508-522.

APA

Fattahi Z, Mohseni M, Beheshtian M, Jafarpour A, Jalalvand K, Keshavarzi F, Behravan H, Ghodratpour F, Ashrafi FZ, Kalhor M, Azad M, Koshki M, Ghaziasadi A, Soveyzi M, Abdollahi A, Kiani SJ, Ataeipirkooh A, Rezaeiazhar I, Bokharaeisalim F, ... Najmabadi H (2022). Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends. Archives of Iranian Medicine, 25(8), 508-522.

Chicago

Fattahi Z, Mohseni M, Beheshtian M, Jafarpour A, Jalalvand K, Keshavarzi F, Behravan H, et al.. "Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends." Archives of Iranian Medicine 25, no. 8 (2022): 508-522.

Harvard

Fattahi Z et al. (2022) 'Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends', Archives of Iranian Medicine, 25(8), pp. 508-522.

Vancouver

Fattahi Z, Mohseni M, Beheshtian M, Jafarpour A, Jalalvand K, Keshavarzi F, et al.. Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends. Archives of Iranian Medicine. 2022;25(8):508-522.

BibTex

@article{ author = {Fattahi Z and Mohseni M and Beheshtian M and Jafarpour A and Jalalvand K and Keshavarzi F and Behravan H and Ghodratpour F and Ashrafi FZ and Kalhor M and Azad M and Koshki M and Ghaziasadi A and Soveyzi M and Abdollahi A and Kiani SJ and Ataeipirkooh A and Rezaeiazhar I and Bokharaeisalim F and Haghshenas MR and Babamahmoodi F and Mokhames Z and Soleimani A and Elahi Z and Ziaee M and Javanmard D and Ghafari S and Ezani A and Moghaddam AA and Shahrakisanavi F and Shahri SMH and Azaran A and Yousefi F and Moattari A and Moghadami M and Fakhim H and Ataei B and Nasri E and Poortahmasebi V and Varshochi M and Mojtahedi A and Jalilian F and Khazeni M and Moradi A and Tabarraei A and Piroozmand A and Yahyapour Y and Bayani M and Tavangar F and Yaghoubi M and Keramat F and Tavakoli M and Jalali T and Pouriayevali MH and Salehivaziri M and Khorshid HRK and Najafipour R and Malekzadeh R and Kahrizi K and Jazayeri SM and Najmabadi H}, title = {Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends}, journal = {Archives of Iranian Medicine}, volume = {25}, number = {8}, pages = {508-522}, year = {2022} }

RIS

TY - JOUR
AU - Fattahi Z
AU - Mohseni M
AU - Beheshtian M
AU - Jafarpour A
AU - Jalalvand K
AU - Keshavarzi F
AU - Behravan H
AU - Ghodratpour F
AU - Ashrafi FZ
AU - Kalhor M
AU - Azad M
AU - Koshki M
AU - Ghaziasadi A
AU - Soveyzi M
AU - Abdollahi A
AU - Kiani SJ
AU - Ataeipirkooh A
AU - Rezaeiazhar I
AU - Bokharaeisalim F
AU - Haghshenas MR
AU - Babamahmoodi F
AU - Mokhames Z
AU - Soleimani A
AU - Elahi Z
AU - Ziaee M
AU - Javanmard D
AU - Ghafari S
AU - Ezani A
AU - Moghaddam AA
AU - Shahrakisanavi F
AU - Shahri SMH
AU - Azaran A
AU - Yousefi F
AU - Moattari A
AU - Moghadami M
AU - Fakhim H
AU - Ataei B
AU - Nasri E
AU - Poortahmasebi V
AU - Varshochi M
AU - Mojtahedi A
AU - Jalilian F
AU - Khazeni M
AU - Moradi A
AU - Tabarraei A
AU - Piroozmand A
AU - Yahyapour Y
AU - Bayani M
AU - Tavangar F
AU - Yaghoubi M
AU - Keramat F
AU - Tavakoli M
AU - Jalali T
AU - Pouriayevali MH
AU - Salehivaziri M
AU - Khorshid HRK
AU - Najafipour R
AU - Malekzadeh R
AU - Kahrizi K
AU - Jazayeri SM
AU - Najmabadi H
TI - Disease Waves of Sars-Cov-2 in Iran Closely Mirror Global Pandemic Trends
JO - Archives of Iranian Medicine
VL - 25
IS - 8
SP - 508
EP - 522
PY - 2022
ER -

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