Isfahan University of Medical Sciences

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Faculty Members have conducted research related to the Role of Gut Microbiota in the Pathogenesis of Colorectal Cancer; a Review Article
Sharareh Moghim
Sharareh Moghim

Professor of Medical Virology

Department of Bacteriology and Virology, School of Medicine

Isfahan University of Medical Sciences

All Documents
1. Clonal Repetitive Element Polymerase Chain Reaction Patterns of Pseudomonas Aeruginosa in Diabetic Foot Ulcers, Iran, IJID Regions (2025)
2. Life Quality of Pediatric Patients With Central Nervous System Infections: A 1-Year Follow-Up, Archives of Pediatric Infectious Diseases (2025)
3. Alhagi Maurorum Extract in Combination With Lytic Phage Cocktails: A Promising Therapeutic Approach Against Biofilms of Multi-Drug Resistant P. Mirabilis, Frontiers in Pharmacology (2024)
4. Alterations in the Gut Microbiota and Their Metabolites in Human Intestinal Epithelial Cells of Patients With Colorectal Cancer, Molecular Biology Reports (2024)
5. Alterations in the Gut Microbiota and Their Metabolites in Human Intestinal Epithelial Cells of Patients With Colorectal Cancer, Molecular Biology Reports (2024)
6. Antibiotic Profile Classification of Proteus Mirabilis Using Machine Learning: An Investigation Into Multidimensional Radiomics Features, Computers in Biology and Medicine (2024)
7. Epstein–Barr Virus and Gastric Carcinoma Pathogenesis With Emphasis on Underlying Epigenetic Mechanisms, Discover Oncology (2024)
8. Antimicrobial Efficacy and Prevalence of Microcins: Low Molecular Mass Bacteriocins Produced by Escherichia Coli, International Journal of Peptide Research and Therapeutics (2023)
9. A Phage Cocktail to Control Surface Colonization by Proteus Mirabilis in Catheter-Associated Urinary Tract Infections, Microbiology Spectrum (2022)
10. Alhagi Maurorum Extract Modulates Quorum Sensing Genes and Biofilm Formation in Proteus Mirabilis, Scientific Reports (2022)
11. Assessment of a Multiplex Rt-Pcr for Simultaneous, Rapid Screening of Common Viral Infections of Central Nervous System: A Prospective Study for Enteroviruses and Herpesviruses, Postepy Higieny i Medycyny Doswiadczalnej (2022)
12. Cancer Virotherapy: Targeting Cancer Cells by Microrna Mechanism for Selective Replication of Oncolytic Viruses in These Cells, Koomesh (2022)
13. Cancer Virotherapy: Targeting Cancer Cells by Microrna Mechanism for Selective Replication of Oncolytic Viruses in These Cells, Koomesh (2022)
14. Comparative Real-Time Pcr Quantification of Cytomegalovirus in Severe Early Childhood Caries and Caries-Free Children, European Archives of Paediatric Dentistry (2022)
15. Epiya Motif Genetic Characterization From Helicobacter Pylori Isolates in Distinct Geographical Regions of Iran, Advanced Biomedical Research (2022)
16. Epstein-Barr Virus/Helicobacter Pylori Coinfection and Gastric Cancer: The Possible Role of Viral Gene Expression and Shp1 Methylation, Iranian Journal of Microbiology (2022)
17. Genetic Diversity of Helicobacter Pylori Isolates From Patients With Gastric Diseases in Isfahan, Advanced Biomedical Research (2022)
18. Resistance to First-Line Drugs in Clinical Isolates of Mycobacterium Tuberculosis in Isfahan, Journal of Isfahan Medical School (2022)
19. Significance of the Coexistence of Non-Codon 315 Katg, Inha, and Oxyr-Ahpc Intergenic Gene Mutations Among Isoniazid-Resistant and Multidrug-Resistant Isolates of Mycobacterium Tuberculosis: A Report of Novel Mutations, Pathogens and Global Health (2022)
20. The Characteristic and Potential Therapeutic Effect of Isolated Multidrug-Resistant Acinetobacter Baumannii Lytic Phage, Annals of Clinical Microbiology and Antimicrobials (2022)
21. Viral Aetiology of Acute Central Nervous System Infections in Children, Iran, Journal of Medical Microbiology (2022)
22. Cellular Mir-101-1 Reduces Efficiently the Replication of Hsv-1 in Hela Cells, Intervirology (2021)
23. Determination of Capsular Serotypes, Antibiotic Susceptibility Pattern, and Molecular Mechanism of Erythromycin Resistance Among Clinical Isolates of Group B Streptococcus in Isfahan, Iran, Advanced Biomedical Research (2021)
24. Efficacy of Isolated Bacteriophage Against Biofilm Embedded Colistin-Resistant Acinetobacter Baumannii, Gene Reports (2021)
25. Efficient Process Development for High-Level Production, Purification, Formulation, and Characterization of Recombinant Mecasermin in Escherichia Coli, Biotechnology and Applied Biochemistry (2021)
26. Evaluating the Frequency of Resistance to Pyrazinamide Among Drug-Resistant Strains of Mycobacterium Tuberculosis in Isfahan, Iran, Archives of Clinical Infectious Diseases (2021)
27. From the Urinary Catheter to the Prevalence of Three Classes of Integrons, Β -Lactamase Genes, and Differences in Antimicrobial Susceptibility of Proteus Mirabilis and Clonal Relatedness With Rep-Pcr, BioMed Research International (2021)
28. Prevalence, Population Structure, Distribution of Serotypes, Pilus Islands and Resistance Genes Among Erythromycin-Resistant Colonizing and Invasive Streptococcus Agalactiae Isolates Recovered From Pregnant and Non-Pregnant Women in Isfahan, Iran, BMC Microbiology (2021)
29. Sars-Cov-2, Sars and Mers: Three Formidable Coronaviruses Which Have Originated From Bats; [Sars-Cov-2, Sars-Cov I Mers-Cov: Trzy Grozne Koronawirusy Pochodzace Od Nietoperzy], Postepy Higieny i Medycyny Doswiadczalnej (2021)
30. Characterization of Hypervirulent Extended-Spectrum Β-Lactamase-Producing Klebsiella Pneumoniae Among Urinary Tract Infections: The First Report From Iran, Infection and Drug Resistance (2020)
31. Comparison of Four Invasive Methods for Diagnosis of Helicobacter Pylori Infection: Fluorescence in Situ Hybridization, Histology, Culture, Rapid Urease Test, Molecular Genetics, Microbiology and Virology (2020)
32. Influence of Heterologously Expressed Azurin From Pseudomonas Aeruginosa on the Adhesion and Invasion of Pathogenic Bacteria to the Caco-2 Cell Line, Probiotics and Antimicrobial Proteins (2020)
33. Molecular Assessment of Resistance to Clarithromycin in Helicobacter Pylori Strains Isolated From Patients With Dyspepsia by Fluorescent in Situ Hybridization in the Center of Iran, BioMed Research International (2020)
34. Molecular Characterization of Hospital- and Community-Acquired Streptococcus Agalactiae Isolates Among Nonpregnant Adults in Isfahan, Iran, Advanced Biomedical Research (2020)
35. Sequence-Based Detection of First-Line and Second-Line Drugs Resistance-Associated Mutations in Mycobacterium Tuberculosis Isolates in Isfahan, Iran, Infection, Genetics and Evolution (2020)
36. Analysis of Antibacterial and Antibiofilm Activity of Purified Recombinant Azurin From Pseudomonas Aeruginosa, Iranian Journal of Microbiology (2019)
37. Determination of Surface Proteins Profile, Capsular Genotyping, and Antibiotic Susceptibility Patterns of Group B Streptococcus Isolated From Urinary Tract Infection of Iranian Patients, BMC Research Notes (2019)
38. Inhibition of Herpes Simplex Virus Type 1 Replication by Novel Hsa-Mir-7704 in Vitro, Research in Pharmaceutical Sciences (2019)
39. Investigation of the Characteristics of Multidrug-Resistant (Mdr) Acinetobacter Baumannii Lytic Phage Isolated From the Intensive Care Unit, Journal of Isfahan Medical School (2019)
40. Investigation of the Characteristics of Multidrug-Resistant (Mdr) Acinetobacter Baumannii Lytic Phage Isolated From the Intensive Care Unit, Journal of Isfahan Medical School (2019)
41. Phylogenetic Analysis of Human Bocavirus in Children With Acute Respiratory Infections in Iran, Acta Microbiologica et Immunologica Hungarica (2019)
42. Phylogenetic Analysis of Human Bocavirus in Children With Acute Respiratory Infections in Iran, Acta Microbiologica et Immunologica Hungarica (2019)
43. The Effect of Intestinal Microbiota Metabolites on Ht29 Cell Line Using Mtt Method in Patients With Colorectal Cancer, Gastroenterology and Hepatology from Bed to Bench (2019)
44. The Effect of Intestinal Microbiota Metabolites on Ht29 Cell Line Using Mtt Method in Patients With Colorectal Cancer, Gastroenterology and Hepatology from Bed to Bench (2019)
45. The Rate and Importance of Clostridium Difficile in Colorectal Cancer Patients, Gastroenterology and Hepatology from Bed to Bench (2019)
46. The Rate and Importance of Clostridium Difficile in Colorectal Cancer Patients, Gastroenterology and Hepatology from Bed to Bench (2019)
47. The Study of Mutation in Lasr and Pqsr Genes in Extremely Drug Resistant and Multidrug Resistant Strains of Pseudomonas Aeruginosa From Burn Wound Infection, Jundishapur Journal of Microbiology (2019)
48. Determination of Antimicrobial Resistance Pattern and Molecular Characteristics of Methicillin-Resistant Staphylococcus Aureus Strains Isolated From Patients in a Teaching Hospital of Isfahan, Iran, Gene Reports (2018)
49. Frequency Determination of Carbapenem-Resistant Klebsiella Pneumoniae (Crkp) Isolated From Hospitals in Isfahan of Iran and Evaluation of Synergistic Effect of Colistin and Meropenem on Them, Cellular and Molecular Biology (2018)
50. In-Vitro Evaluation of Mir-101-5P Effect on Herpes Simplex Virus Replication, Journal of Isfahan Medical School (2018)
51. Role of Gut Microbiota in the Pathogenesis of Colorectal Cancer; a Review Article, Gastroenterology and Hepatology from Bed to Bench (2018)
52. Role of Gut Microbiota in the Pathogenesis of Colorectal Cancer; a Review Article, Gastroenterology and Hepatology from Bed to Bench (2018)
53. The Effect of Mirna Mimic Hsa-Mir-7704 on In-Vitro Replication of Herpes Simplex Virus Type 1, Journal of Isfahan Medical School (2018)
54. Estimation of Health Risks Caused by Exposure to Enteroviruses From Agricultural Application of Wastewater Effluents, Water Research (2017)
55. Estimation of Health Risks Caused by Exposure to Enteroviruses From Agricultural Application of Wastewater Effluents, Water Research (2017)
56. Genetic Lineages of Mycobacterium Tuberculosis Isolates in Isfahan, Iran, Current Microbiology (2017)
57. Isolation of Bacteriophages Against Multidrug Resistant Acinetobacter Baumannii, Research in Pharmaceutical Sciences (2017)
58. Targeting Human Breast Cancer Cells by an Oncolytic Adenovirus Using Microrna-Targeting Strategy, Virus Research (2017)
59. Targeting Human Breast Cancer Cells by an Oncolytic Adenovirus Using Microrna-Targeting Strategy, Virus Research (2017)
60. The Study of H. Pylori Putative Candidate Factors for Single- and Multi-Component Vaccine Development, Critical Reviews in Microbiology (2017)
61. Analysis of Dna Gyra Gene Mutation in Clinical and Environmental Ciprofloxacin-Resistant Isolates of Non-Tuberculous Mycobacteria Using Molecular Methods, Jundishapur Journal of Microbiology (2016)
62. Determination of Nontuberculosis Mycobacteria Species Genotypes Present in Cattle Milk Samples Using 16S Rrna Gene Direct Sequencing, Journal of Isfahan Medical School (2016)
63. Phylogenetic Analysis of Prevalent Tuberculosis and Non-Tuberculosis Mycobacteria in Isfahan, Iran, Based on a 360 Bp Sequence of the Rpob Gene, Jundishapur Journal of Microbiology (2016)
64. Selective Replication of Mir-145-Regulated Oncolytic Adenovirus in Mcf-7 Breast Cancer Cells, Future Virology (2016)
65. Selective Replication of Mir-145-Regulated Oncolytic Adenovirus in Mcf-7 Breast Cancer Cells, Future Virology (2016)
66. The Bioinformatics Report of Mutation Outcome on Nadph Flavin Oxidoreductase Protein Sequence in Clinical Isolates of H. Pylori, Current Microbiology (2016)
67. Antibiotic Resistance Patterns and Genetic Diversity in Clinical Isolates of Pseudomonas Aeruginosa Isolated From Patients of a Referral Hospital, Isfahan, Iran, Jundishapur Journal of Microbiology (2015)
68. Awareness of Congenital Cytomegalovirus Infection Among General Practitioners and Midwives, Journal of Isfahan Medical School (2015)
69. Clonal Relatedness Among Imipenem-Resistant Pseudomonas Aeruginosa Isolated From Icu-Hospitalized Patients, Critical Care Research and Practice (2015)
70. Evaluation of Stability and Maturity Parameters in Wastewater Sludge Composting With Different Aeration Strategies and a Mixture of Green Plant Wastes As Bulking Agent, Fresenius Environmental Bulletin (2015)
71. Evaluation of Various Staphylococcal Cassette Chromosome Mec (Sccmec) Types in Staphylococcus Epidermidis Invasive Strains From Hospitalized Patients in Iran; [Valutazione Di Tipi Diversi Di Cassetta Cromosomica Stafilococcica Mec (Sccmec) in Ceppi Invasivi Di Staphylococcus Epidermidis Isolate Da Pazienti Ospedalizzati in Iran], Infezioni in Medicina (2015)
72. Morphological and Bactericidal Effects of Amikacin, Meropenem and Imipenem on Pseudomonas Aeruginosa, Jundishapur Journal of Microbiology (2015)
73. Production of Ifn-Γ and Il-4 Against Intact Catalase and Constructed Catalase Epitopes of Helicobacter Pylori From T-Cells, Jundishapur Journal of Microbiology (2015)
74. Sewage Sludge Composting: Quality Assessment for Agricultural Application, Environmental Monitoring and Assessment (2015)
75. Characterization of Staphylococcus Epidermidis Isolates From Hospitalized Patients in Isfahan and Tehran Teaching Hospitals, Molecular Genetics, Microbiology and Virology (2014)
76. Effect of Lagerstroemia Tomentosa and Diospyros Virginiana Methanolic Extracts on Different Drug-Resistant Strains of Mycobacterium Tuberculosis, Research in Pharmaceutical Sciences (2014)
77. Frequency of Multi-Drug Resistance Acinetobacter Baumannii Isolates in Intensive Care Units (Icu) of Isfahan Hospitals, Iran, Via Molecular Method and Their Antimicrobial Resistance Patterns, Journal of Isfahan Medical School (2014)
78. Identification and Frequency of Colistin-Resistant Acintobacter Baumanii in Clinical Isolates Using Polymerase Chain Reaction, Journal of Isfahan Medical School (2014)
79. Identification of Non-Tuberculosis Mycobacteria Isolates by Polymerase Chain Reaction-Restriction Enzyme Analysis of 360-Bp Fragment of Rpob Gene, Journal of Isfahan Medical School (2014)
80. Molecular Detection of Clostridium Difficile in Patients With Diarrhea Via Lamp Technique, Journal of Mazandaran University of Medical Sciences (2014)
81. Morphological and Bactericidal Effects of Different Antibiotics on Helicobacter Pylori, Jundishapur Journal of Microbiology (2014)
82. Phenotypic and Genotypic Detection of Staphylococcus Epidermidis Delta Toxin From Neonatal Patients in Isfahan and Tehran University Hospitals, Molecular Genetics, Microbiology and Virology (2014)
83. Prevalence of Herpetic Keratitis in Patients Referred to Feiz Ophthalmology Centre, Isfahan, Iran, Using Polymerase Chain Reaction Method, Journal of Isfahan Medical School (2014)
84. The Effect of Isolated Bacteriophage on Multi-Drug Resistant (Mdr) Pseudomonas Aeruginosa, Journal of Isfahan Medical School (2014)
85. A Comparison Between Polymerase Chain Reaction, Oxacillin Agar Dilusion and Cefoxitin Disk Diffusion Methods in Detection of Methicillin Resistance in Staphylococcus Aureus, Journal of Isfahan Medical School (2013)
86. Assessment of Cage and Baba Mrna Expression During Morphological Conversion of Helicobacter Pylori From Spiral to Coccoid, Current Microbiology (2013)
87. Bk Virus Excretion in Acquired Immunocompromised Children: A Comparison Between Kidney Transplant Recipients and Steroid Resistant Nephrotic Syndrome, Journal of Research in Medical Sciences (2013)
88. Determination of Prevalence, Sensitivity and Specificity of Clinical Signs and Symptoms of Adenoviral Keratoconjunctivitis, Journal of Isfahan Medical School (2013)
89. Ethambutol-Susceptibility of Clinical and Environmental Atypical Mycobacteria Isolated From Isfahan, Iran, Journal of Isfahan Medical School (2013)
90. Evaluating Helicobacter Pylori Flaa in Clinical Isolates From Alzahra Hospital, Isfahan, Iran, Journal of Isfahan Medical School (2013)
91. Evaluation of the Knowledge of Young Couples About the Ways of Transmission and Prevention of Influenza Type a in a Private Consulting Center in Isfahan, Iran, Journal of Isfahan Medical School (2013)
92. Frequency and Resistance Patterns of Bacterial Isolates From Burn Wounds Infections in Isfahan, Iran, Journal of Isfahan Medical School (2013)
93. Isolation and Identification of Nocardia Species From Soil Samples According to Comparison of Three Methods, Journal of Isfahan Medical School (2013)
94. Physicians and Nurses' Awareness of Transmission and Prevention Methods of Congenital Cytomegalovirus Infection, Journal of Isfahan Medical School (2013)
95. Prevalence of Rotavirus Gastroenteritis and Circulating Genotypes in Children With Acute Gastroenteritis Admitted in Imam Hossein Hospital, Isfahan, Iran; 2013, Journal of Isfahan Medical School (2013)
96. Resistance Pattern of Helicobacter Pylori Strains to Clarithromycin, Metronidazole, and Amoxicillin in Isfahan, Iran, Journal of Research in Medical Sciences (2013)
97. Study of Type and Antimicrobial Resistance in Sternal Wound Infection Following Coronary Artery Bypass Graft Surgery, Journal of Isfahan Medical School (2013)
98. Detection of Morphotyping Characteristics Identification Antibiotic Resistance of Pseudomonas Aeruginosa Isolated Form Cystic Fibrosis Patient, Journal of Isfahan Medical School (2012)
99. Development of Pcr-Based Method for Detection of Enterobacteriaceae in Septicemia, Journal of Research in Medical Sciences (2012)
100. Enhanced Taxane Production and Secretion From Taxus Baccata Cell Culture by Adding Dimethylsulfoxide, Biotechnology and Applied Biochemistry (2012)
101. Frequency of Rotavirus in Children Under Three Years of Age With Gastroenteritis, Journal of Isfahan Medical School (2012)
102. Hiv/Aids-Related Knowledge of Young Couples Attending Pre-Marriage Counseling Centers in Isfahan, Iran, Journal of Isfahan Medical School (2012)
103. Identification of Nontuberculous Mycobacteria Species Isolated From Water Samples Using Phenotypic and Molecular Methods and Determination of Their Antibiotic Resistance Patterns by E- Test Method, in Isfahan, Iran, Iranian Journal of Basic Medical Sciences (2012)
104. Molecular Characterization of Environmental Non-Tuberculous Mycobacteria Using Pcr- Rflp Analysis of 441 Bp Heat Shock Protein 65 Fragments, Iranian Journal of Public Health (2012)
105. Optimization of the Basal Medium for Improving Production and Secretion of Taxanes From Suspension Cell Culture of Taxus Baccata L, DARU, Journal of Pharmaceutical Sciences (2012)
106. Pseudomonas Aeruginosa Infections in Patients, Hospital Means, and Personnel's Specimens, Journal of Research in Medical Sciences (2012)
107. Rapid and Accurate Identification of Mycobacterium Tuberculosis Complex and Common Non-Tuberculous Mycobacteria by Multiplex Real-Time Pcr Targeting Different Housekeeping Genes, Current Microbiology (2012)
108. Simultaneous Detection of Integrase and Antibiotic Resistance Genes Within Sxt Constin in Vibrio Cholerae O1 El Tor Strains Isolated From Iran Using Multiplex-Pcr, Iranian Journal of Basic Medical Sciences (2012)
109. Two Dimensional Structural Analysis and Expression of a New Staphylococcus Aureus Adhesin Based Fusion Protein, Iranian Journal of Basic Medical Sciences (2012)
110. Urinary Bk Virus Excretion in Children Newly Diagnosed With Acute Lymphoblastic Leukemia, International Journal of Preventive Medicine (2012)
111. A Survey on the Prevalence of High-Risk Subtypes of Human Papilloma Virus Among Women With Cervical Neoplasia in Isfahan University of Medical Science, Archives of Gynecology and Obstetrics (2011)
112. Catalase Epitopes Vaccine Design for Helicobacter Pylori: A Bioinformatics Approach, African Journal of Biotechnology (2011)
113. Comparison of Epothilone and Taxol Binding in Yeast Tubulin Using Molecular Modeling, Avicenna Journal of Medical Biotechnology (2011)
114. Frequency of Bk Virus in Urine Samples of Childrens Below 18 Years Old With Acute Lymphoblastic Leukemia in Comparision to Normal Populatin, Journal of Isfahan Medical School (2011)
115. A Survey on Herpes Simplex Type 2 Antibody Among Pregnant Women in Isfahan, Iran, Journal of Research in Medical Sciences (2010)
116. Quantification of Ergovaline Using Hplc and Mass Spectrometry in Iranian Neotyphodium Infected Tall Fescue, Research in Pharmaceutical Sciences (2010)
117. Construction of a New Fusion Protein Vector Associated to Fibronectin Binding Protein a and Clumping Factor a Derived From Staphylococcus Aureus Nctc8325, Iranian Journal of Basic Medical Sciences (2009)
118. Designing a Non-Virulent Hiv-1 Strain: Potential Implications for Vaccine and Experimental Research, Journal of Research in Medical Sciences (2007)
119. Evaluation of Tert Mrna Alternative Spliced Variants in Aortic Endothelial Cells of the Rabbit, in the Fatty Streaks Stage of Atherosclerosis, Acta Cardiologica (2007)
120. Prevalence of Epstein-Barr Virus Type 1 in Patients With Chronic Periodontitis by Nested-Pcr, Pakistan Journal of Biological Sciences (2007)
121. Prevalence of Porphyromonas Gingivalis and Bacteroides Forsythus in Chronic Periodontitis by Multiplex Pcr, Pakistan Journal of Biological Sciences (2007)